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In the third century, during the persecution of Decius, some Christians fled to the desert, and remained there to pray after the persecutions abated. This was the beginning of the monastic movement, which was reorganized by the saints Anthony the Great and Pachomius in the 4th century. By the end of the century, there were hundreds of monasteries, and thousands of cells and caves scattered throughout the Egyptian hills. A number of these monasteries are still flourishing and have new vocations till this day.

Today devout Muslims believe that Islam defines one's relationship to God, to other Muslims, and to non-Muslims. They also believe that there can be no dichotomy between the sacred and the secular. Many devout Muslims say that Egypt's governments have been secularist and even antireligious since the early 1920s. Politically organized Muslims who seek to purge the country of its secular policies are referred to as "Islamists."

The region around the Nile is one of the oldest continually-inhabited areas in the world. Ancient Egyptian musicians are known to have played harps and flutes circa 4000 BC, and double clarinets and lyres from around 3500 BC. Percussion instruments were added to orchestras by 2000 BC. It is probable that no system of musical notation existed at the time, as none have survived. The music of ancient Egypt has not been documented, but some musicologists believe that the liturgical music of the Coptic Church is directly descended from ancient Egyptian music.

The Royal Library of Alexandria was once the largest in the world. It is usually assumed to have been founded at the beginning of the 3rd century BC during the reign of Ptolemy II of Egypt after his father had set up the Temple of the Muses or Museum. The initial organization is attributed to Demetrius Phalereus. The Library is estimated to have stored at its peak 400,000 to 700,000 scrolls.

A mummy is a preserved corpse which due to shielding from decomposition by either natural or artificial means, has retained their physical form. This can be achieved by exposing the body to extreme draught or cold, lack of oxygen or by use of chemicals.

Ancient Egyptian literature dates back to the Old Kingdom, in the third millennium BC. Religious literature is best known for its hymns to various gods and its mortuary texts. The oldest extant Egyptian literature are the Pyramid Texts: the mythology and rituals carved around the tombs of rulers. The later, secular literature of ancient Egypt includes the 'wisdom texts', forms of philosophical instruction. The Instruction of Ptahhotep, for example, is a collation of moral proverbs by an Egyptian administrator. The authors of the literature of the Old and Middle Kingdoms (through to the middle of the second millennium BC) seem to have been drawn from an elite administrative class, and were celebrated and revered into the New Kingdom (to the end of the second millennium). In time the Pyramid Texts became Coffin Texts (perhaps after the end of the Old Kingdom), and finally the mortuary literature produced its masterpiece, the Book of the Dead, during the New Kingdom.

In Egypt, the dead were originally not mummified with the extensive process that happened during the first dynasty. The dead were originally buried in reed caskets in the sand. The searing hot sand caused the remains to dry quickly, preventing decomposition. After a while, though, they started constructing wooden tombs, and the extensive process of mummification was made so that the bodies would not decompose in the afterlife.

Coptic Orthodox Christianity is the indigenous form of Christianity that, according to tradition, the apostle Mark established in Egypt in the middle of the 1st century AD (approximately AD 60). It is the national church of Egypt. The church is one of the Oriental Orthodox churches. Its leader is the Pope of Alexandria and the Patriarch of the Holy See of Saint Mark. The current incumbent is Pope Shenouda III.